STRINGSTRING
saur1 protein (Zea mays) - STRING interaction network
"saur1" - Small auxin up RNA1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
saur1Small auxin up RNA1 (147 aa)    
Predicted Functional Partners:
Zm.10314
Origin recognition complex subunit 5 (554 aa)
           
  0.529
GRMZM2G159678_P02
Receptor protein kinase-like protein (241 aa)
           
  0.467
GRMZM2G022054_P01
Hypothetical protein LOC100217031 (265 aa)
           
  0.467
GRMZM2G142109_P04
Cytochrome oxidase subunit II Fragment ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (437 aa)
           
  0.461
COL14
Hypothetical protein LOC100193195 (406 aa)
           
  0.408
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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