STRINGSTRING
GRMZM2G468702_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G468702_P01" - Photosystem II reaction center Psb28 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G468702_P01Photosystem II reaction center Psb28 protein (260 aa)    
Predicted Functional Partners:
GRMZM2G056424_P01
Photosystem II 11 kD protein (170 aa)
   
          0.522
Zm.80957
Photosystem II 11 kD protein (167 aa)
   
          0.521
GRMZM5G897592_P02
Hypothetical protein LOC100382419 (185 aa)
   
          0.519
Zm.33715
Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic (403 aa)
   
          0.512
Zm.28224
Photosystem I reaction center subunit II (236 aa)
   
          0.505
GRMZM2G013342_P01
Hypothetical protein LOC100191984 (199 aa)
   
          0.503
csu471
Hypothetical protein LOC100193128 (363 aa)
   
          0.501
Zm.11557
Hypothetical protein LOC100275482 (231 aa)
   
          0.497
GRMZM5G801291_P01
Annotation not available (79 aa)
   
          0.496
GRMZM2G091887_P02
Annotation not available (130 aa)
   
          0.495
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]