STRINGSTRING
Zm.132891 protein (Zea mays) - STRING interaction network
"Zm.132891" - Carnitine racemase like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.132891Carnitine racemase like protein (LOC100285527), mRNA (160 aa)    
Predicted Functional Partners:
Zm.3321
Putative uncharacterized proteinVacuolar sorting receptor 1 ; (629 aa)
           
  0.530
pco087010a
LOC100282809 (294 aa)
           
  0.530
umc1431
Hypothetical protein LOC100273187 (127 aa)
           
  0.529
GRMZM2G144367_P01
Stromal cell-derived factor 2 (216 aa)
           
  0.528
pco132860
LOC100282939 (216 aa)
           
  0.528
Zm.22608
Auxin-responsive protein ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (178 aa)
           
  0.525
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (6%) [HD]