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Zm.142568 protein (Zea mays) - STRING interaction network
"Zm.142568" - ultraviolet-B-repressible protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.142568ultraviolet-B-repressible protein (122 aa)    
Predicted Functional Partners:
pco070877
LOC100283816 (127 aa)
     
 
  0.880
psb29
Photosystem II subunit29 (291 aa)
     
      0.875
GRMZM2G067883_P01
Uncharacterized protein (120 aa)
       
 
  0.851
GRMZM2G062044_P01
Cytochrome b559 subunit alpha (PSII reaction center subunit V) (83 aa)
       
 
  0.850
GRMZM2G329047_P01
Photosystem I reaction center subunit V (145 aa)
     
        0.832
GRMZM2G377168_P01
Hypothetical protein LOC100276652 (104 aa)
     
   
  0.797
Zm.141746
Uncharacterized protein (337 aa)
     
 
  0.796
Zm.3442
Uncharacterized protein (258 aa)
     
 
  0.796
bsd2
Bundle sheath defective2 (129 aa)
     
        0.781
GRMZM2G110294_P01
Hypothetical protein LOC100275314 (125 aa)
     
        0.777
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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