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STRINGSTRING
sdg127 protein (Zea mays) - STRING interaction network
"sdg127" - Putative SET-domain containing protein family in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdg127Putative SET-domain containing protein family (710 aa)    
Predicted Functional Partners:
GRMZM2G015200_P01
Uncharacterized protein (213 aa)
       
 
  0.950
103638205
Helicase protein MOM1 (1990 aa)
     
 
  0.943
gpm667
Retinoblastoma-binding protein-like (589 aa)
     
 
  0.907
GRMZM2G453008_P01
Protein TRAUCO (226 aa)
     
 
  0.872
GRMZM2G145666_P01
Protein TRAUCO (454 aa)
     
 
  0.872
GRMZM2G119678_P02
Uncharacterized protein (289 aa)
     
 
  0.862
AC209858.4_FGP003
annotation not available (493 aa)
     
 
  0.862
gpm703
Protein arginine N-methyltransferase PRMT10; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (377 aa)
       
 
  0.840
GRMZM2G115453_P01
Uncharacterized protein (177 aa)
     
 
  0.822
100276374
COMPASS-like H3K4 histone methylase component WDR5A (319 aa)
     
 
  0.822
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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