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STRINGSTRING
c3h23 protein (Zea mays) - STRING interaction network
"c3h23" - Zinc finger CCCH domain-containing protein 58 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c3h23Zinc finger CCCH domain-containing protein 58 (448 aa)    
Predicted Functional Partners:
GRMZM5G854199_P01
Transducin family protein / WD-40 repeat family protein (405 aa)
     
 
  0.746
103627657
annotation not available (704 aa)
     
   
  0.658
100281499
Fimbrin 1 (705 aa)
     
   
  0.658
GRMZM2G008972_P01
annotation not available (320 aa)
           
  0.534
103627357
annotation not available (677 aa)
     
   
  0.505
100276484
Peptidase C15 pyroglutamyl peptidase I-like (217 aa)
           
  0.459
GRMZM2G040515_P02
Peptidyl-prolyl cis-trans isomerase PASTICCINO1 (184 aa)
           
  0.459
103633744
annotation not available (400 aa)
           
  0.437
GRMZM2G036697_P01
Chorismate synthase chloroplastic; Putative RING zinc finger domain superfamily protein (400 aa)
           
  0.437
103633227
annotation not available (1080 aa)
           
  0.422
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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