• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
nlp6 protein (Zea mays) - STRING interaction network
"nlp6" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlp6annotation not available (916 aa)    
Predicted Functional Partners:
TCP20
Transcription factor TCP11 (315 aa)
           
  0.682
NIR
Ferredoxin--nitrite reductase, chloroplastic (597 aa)
           
  0.624
myb45
annotation not available (1060 aa)
           
  0.590
103630501
annotation not available (600 aa)
           
  0.583
103637664
annotation not available (595 aa)
           
  0.583
103637665
annotation not available (588 aa)
           
  0.583
npf1
Protein NRT1/ PTR FAMILY 6.3 (608 aa)
           
  0.583
100193471
annotation not available (566 aa)
           
  0.569
hagtf33
annotation not available (306 aa)
           
  0.560
hagtf31
annotation not available (296 aa)
           
  0.560
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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