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100304231 protein (Zea mays) - STRING interaction network
"100304231" - Pre-mRNA-processing protein 40C in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100304231Pre-mRNA-processing protein 40C (634 aa)    
Predicted Functional Partners:
GRMZM2G030659_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (1065 aa)
     
 
  0.995
103643327
annotation not available (747 aa)
     
 
  0.987
103653436
Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein (882 aa)
     
 
  0.987
103654338
Microfibrillar-associated protein-related (430 aa)
     
 
  0.983
GRMZM5G838403_P01
Pre-mRNA-splicing factor of RES complex protein (531 aa)
     
      0.974
100217215
Pre-mRNA-splicing factor 3 (861 aa)
     
 
  0.966
100277544
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.966
GRMZM2G494600_P01
annotation not available (487 aa)
     
 
  0.965
cl56055_1
SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein (641 aa)
     
 
  0.960
100383468
Putative splicing factor 3A subunit 1 (807 aa)
     
 
  0.956
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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