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STRINGSTRING
GRMZM2G483975_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G483975_P01" - Uncharacterized protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
Databases
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[Homology]
Score
GRMZM2G483975_P01Uncharacterized protein (298 aa)    
Predicted Functional Partners:
GRMZM5G854199_P01
Transducin family protein / WD-40 repeat family protein (405 aa)
     
 
  0.746
nfd110
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (651 aa)
     
   
  0.717
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
   
  0.717
pco137268b
Zinc finger CCCH domain-containing protein 40 (454 aa)
           
  0.715
gtc102
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1055 aa)
     
   
  0.701
GRMZM2G323838_P01
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the pescadillo family (408 aa)
     
   
  0.588
pco136431
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (619 aa)
     
   
  0.588
100383161
RNA-binding KH domain-containing protein (426 aa)
     
 
  0.574
103638431
RNA-binding KH domain-containing protein (667 aa)
     
 
  0.574
103630072
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (644 aa)
     
   
  0.539
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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