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Zm.21123 protein (Zea mays) - STRING interaction network
"Zm.21123" - 1-deoxy-D-xylulose 5-phosphate synthase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.211231-deoxy-D-xylulose 5-phosphate synthase (727 aa)    
Predicted Functional Partners:
dxr
Dxr protein (472 aa)
 
 
  0.882
Zm.146028
Uncharacterized protein (500 aa)
 
 
  0.790
GRMZM2G379271_P01
Uncharacterized protein (228 aa)
 
 
  0.782
pco116062
Hydroxymethylbutenyl 4-diphosphate synthase (746 aa)
 
   
  0.737
HDR
Hypothetical protein LOC100383164 (462 aa)
 
   
  0.717
AC209374.4_FGP002
Hypothetical protein LOC100276918 (225 aa)
 
     
  0.702
Zm.155622
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (226 aa)
 
     
  0.702
GRMZM2G095806_P01
Hypothetical protein LOC100280079 (526 aa)
   
   
  0.701
umc2169
LOC100282760 (410 aa)
   
   
  0.684
Zm.88065
Putative geranylgeranyl pyrophosphate synthase 1 (367 aa)
 
   
  0.640
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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