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STRINGSTRING
cl6565_-2 protein (Zea mays) - STRING interaction network
"cl6565_-2" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl6565_-2Uncharacterized protein (578 aa)    
Predicted Functional Partners:
GRMZM2G043764_P02
Ninja-family protein 7 (478 aa)
       
 
  0.900
gpm667
Retinoblastoma-binding protein-like (589 aa)
     
 
  0.794
100274569
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (256 aa)
       
 
  0.788
100273242
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (294 aa)
       
 
  0.769
100191581
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (244 aa)
       
 
  0.767
hda108
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (458 aa)
     
 
  0.745
103636631
Putative CBL-interacting protein kinase family protein (492 aa)
       
 
  0.728
GRMZM2G453008_P01
Protein TRAUCO (226 aa)
     
 
  0.725
GRMZM2G145666_P01
Protein TRAUCO (454 aa)
     
 
  0.725
100304074
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (343 aa)
       
      0.673
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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