STRINGSTRING
Zm.5368 protein (Zea mays) - STRING interaction network
"Zm.5368" - Putative leucine--tRNA ligase, mitochondrial in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5368Putative leucine--tRNA ligase, mitochondrial (343 aa)    
Predicted Functional Partners:
Zm.2572
Uncharacterized protein (802 aa)
   
  0.980
Zm.151704
Probable methionine--tRNA ligase (802 aa)
   
  0.980
Zm.20172
Probable methionine--tRNA ligase (801 aa)
   
  0.980
Zm.5463
prolyl-tRNA synthetase (560 aa)
   
  0.960
GRMZM2G094123_P01
Hypothetical protein LOC100272402 (508 aa)
   
  0.960
AC202120.3_FGP003
Annotation not available (125 aa)
   
  0.960
GRMZM2G095350_P01
Annotation not available (371 aa)
   
  0.943
TIDP3394
Hypothetical protein LOC100191658 (882 aa)
   
  0.942
Zm.28635
Hypothetical protein LOC100275420 (LOC100275420), mRNA (537 aa)
   
  0.941
GRMZM2G386125_P01
Uncharacterized protein (452 aa)
   
  0.941
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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