STRINGSTRING
MSRB5.1 protein (Zea mays) - STRING interaction network
"MSRB5.1" - LOC100281999 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSRB5.1LOC100281999 (141 aa)    
Predicted Functional Partners:
GRMZM2G022413_P01
Peptide methionine sulfoxide reductase (185 aa)
 
 
  0.989
Zm.13703
LOC100285733 (259 aa)
 
 
  0.964
GRMZM2G136522_P01
Hypothetical protein LOC100216789 (523 aa)
   
 
  0.827
trxh1
Thioredoxin h1 protein (128 aa)
   
 
  0.772
GRMZM5G822426_P02
Hypothetical protein LOC100193843 (459 aa)
   
 
  0.757
trh2
Thioredoxin h homolog2 (122 aa)
   
 
  0.751
GRMZM2G082886_P01
Thioredoxin H-type (120 aa)
   
 
  0.751
pco072881
Hypothetical protein LOC100273021 (201 aa)
   
 
  0.738
gpm605
Thioredoxin F-type (180 aa)
   
 
  0.738
GRMZM5G869196_P01
Electron transporter/ thiol-disulfide exchange intermediate (300 aa)
   
 
  0.725
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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