STRINGSTRING
Zm.5819 protein (Zea mays) - STRING interaction network
"Zm.5819" - Carbamoyl-phosphate synthase large chain, chloroplastic-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5819Carbamoyl-phosphate synthase large chain, chloroplastic-like (1174 aa)    
Predicted Functional Partners:
GRMZM2G147450_P01
Hypothetical protein LOC100273931 (446 aa)
 
  0.999
pco072185
Hypothetical protein LOC100193467 (488 aa)
 
  0.999
GRMZM2G367026_P01
Hypothetical protein LOC100382013 (822 aa)
   
  0.999
gpm370
Hypothetical protein LOC100274407 (1052 aa)
   
  0.999
Zm.97516
Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (521 aa)
   
   
  0.999
Zm.25861
Hypothetical protein LOC100192064 (1418 aa)
   
   
  0.999
Zm.1138
LOC100282373 (364 aa)
   
  0.996
GRMZM2G080380_P01
Aspartate carbamoyltransferase 1 (369 aa)
   
  0.996
GRMZM2G010406_P01
Hypothetical protein LOC100274106 (481 aa)
 
 
  0.986
umc2770
Hypothetical protein LOC100383569 (545 aa)
   
   
  0.983
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]