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STRINGSTRING
rpl17 protein (Zea mays) - STRING interaction network
"rpl17" - 60S ribosomal protein L17 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl1760S ribosomal protein L17 ; Belongs to the universal ribosomal protein uL22 family (171 aa)    
Predicted Functional Partners:
mta1
60S ribosomal protein L13a-1 (206 aa)
 
 
  0.996
100280746
60S ribosomal protein L7a; Uncharacterized protein (258 aa)
 
 
  0.996
LOC542200
40S ribosomal protein S20 ; Belongs to the universal ribosomal protein uS10 family (126 aa)
 
 
  0.995
rpl5b
60S ribosomal protein L5-1; Uncharacterized protein (302 aa)
 
 
  0.995
541695
60S ribosomal protein L23a; Uncharacterized protein ; Belongs to the universal ribosomal protein uL23 family (155 aa)
 
 
  0.995
100192625
60S ribosomal protein L14-1 (135 aa)
 
 
  0.994
100283242
40S ribosomal protein S16 ; Belongs to the universal ribosomal protein uS9 family (148 aa)
 
 
  0.994
100194265
40S ribosomal protein S16; Uncharacterized protein ; Belongs to the universal ribosomal protein uS9 family (149 aa)
 
 
  0.994
TIDP3261
60S ribosomal protein L31 (124 aa)
   
 
  0.993
100194044
40S ribosomal protein S20; Uncharacterized protein (128 aa)
 
 
  0.993
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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