STRINGSTRING
Zm.20281 protein (Zea mays) - STRING interaction network
"Zm.20281" - Zinc finger CCCH domain-containing protein 44-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.20281Zinc finger CCCH domain-containing protein 44-like (1152 aa)    
Predicted Functional Partners:
pco074093
Splicing factor U2AF 65 kDa subunit (594 aa)
     
 
  0.666
GRMZM2G126839_P01
Hypothetical protein LOC100383918 (635 aa)
     
 
  0.666
GRMZM2G057450_P01
Hypothetical protein LOC100192903 (539 aa)
     
 
  0.666
Zm.96056
Uncharacterized LOC103648165 (704 aa)
     
 
  0.666
GRMZM2G022763_P03
Hypothetical protein LOC100272843 (590 aa)
     
 
  0.666
GRMZM5G875918_P01
Annotation not available (413 aa)
     
 
  0.464
GNAT3
Glucosamine 6-phosphate N-acetyltransferase (163 aa)
       
      0.461
GRMZM5G848541_P01
Putative uncharacterized protein (172 aa)
     
 
  0.451
GRMZM2G417725_P01
Annotation not available (371 aa)
     
 
  0.451
GRMZM2G400238_P02
Hypothetical protein LOC100381591 (1167 aa)
     
 
  0.451
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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