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LOC542390 protein (Zea mays) - STRING interaction network
"LOC542390" - Nuclear transcription factor Y subunit B in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC542390Nuclear transcription factor Y subunit B; Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (178 aa)    
Predicted Functional Partners:
100281601
Nuclear transcription factor Y subunit C-1 (245 aa)
     
 
  0.924
ca5p3
CCAAT-HAP5 transcription factor; Nuclear transcription factor Y subunit C-2; Uncharacterized protein (255 aa)
     
 
  0.875
100217109
Nuclear transcription factor Y subunit C-2; Uncharacterized protein (248 aa)
     
 
  0.875
CA5P15
Histone-like transcription factor and archaeal histone family protein (203 aa)
     
 
  0.872
100273685
Nuclear transcription factor Y subunit C-2; Nuclear transcription factor Y subunit C-2 isoform 1; Nuclear transcription factor Y subunit C-2 isoform 2; Nuclear transcription factor Y subunit C-2 isoform 3; Uncharacterized protein (251 aa)
     
 
  0.799
pco061382
Histone-lysine N-methyltransferase ATX4 (1591 aa)
     
 
  0.731
uaz7c01g06
Nuclear transcription factor Y subunit A-1; Uncharacterized protein (264 aa)
     
 
  0.729
ca2p5
annotation not available (153 aa)
     
 
  0.703
CA2P6
CCAAT-HAP2-transcription factor 26 (322 aa)
     
 
  0.703
CA2P10
Nuclear transcription factor Y subunit A-10 (341 aa)
     
 
  0.703
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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