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GRMZM5G805350_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G805350_P01" - Glycine--tRNA ligase chloroplastic/mitochondrial 2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G805350_P01Glycine--tRNA ligase chloroplastic/mitochondrial 2 (77 aa)    
Predicted Functional Partners:
GRMZM2G478664_P01
annotation not available (537 aa)
   
   
  0.914
TIDP3394
Heptahelical transmembrane protein 5 (882 aa)
   
   
  0.855
GRMZM2G386125_P01
GTP binding (452 aa)
   
   
  0.854
100283555
Proline--tRNA ligase chloroplastic/mitochondrial (560 aa)
     
   
  0.835
103650047
annotation not available (613 aa)
           
  0.829
100383520
Glycine--tRNA ligase mitochondrial 1 (692 aa)
     
 
    0.802
103643028
annotation not available (692 aa)
     
 
    0.802
RpoT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (952 aa)
     
   
  0.791
542538
Seryl-tRNA synthetase (512 aa)
     
   
  0.789
pco116016
Valine--tRNA ligase chloroplastic/mitochondrial 2 (403 aa)
     
   
  0.754
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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