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Zm.3050 protein (Zea mays) - STRING interaction network
"Zm.3050" - Ras-related protein Rab-18 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.3050Ras-related protein Rab-18 (215 aa)    
Predicted Functional Partners:
IDP343
LOC100284677 (233 aa)
       
      0.897
Zm.5949
VPS28-like protein (213 aa)
       
      0.660
Zm.37718
Uncharacterized protein (213 aa)
       
      0.660
GRMZM2G075719_P02
Hypothetical protein LOC100274535 (LOC100274535), mRNA (249 aa)
   
 
0.612
IDP871
LOC100281229 (213 aa)
   
 
0.611
GRMZM2G169694_P01
Ras-related protein Rab-6A (208 aa)
   
 
0.609
Zm.72608
Ras-related protein RABH1b-like (209 aa)
   
 
0.607
GRMZM2G700014_P02
Annotation not available (888 aa)
     
 
  0.575
Zm.18033
Rab3 GTPase-activating protein catalytic subunit (726 aa)
     
 
  0.575
AC190632.2_FGP004
Uncharacterized protein (214 aa)
     
 
  0.571
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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