STRINGSTRING
Zm.538 protein (Zea mays) - STRING interaction network
"Zm.538" - Calcium exchanger1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.538Calcium exchanger1 (506 aa)    
Predicted Functional Partners:
GRMZM2G171507_P02
Hypothetical protein LOC100193569 (451 aa)
       
 
  0.752
Zm.103506
CBL-interacting protein kinase 24 (449 aa)
       
 
  0.752
Zm.141995
Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family (1283 aa)
     
      0.708
pco139225b
Hypothetical protein LOC100192524 (374 aa)
     
        0.703
GRMZM2G428386_P02
Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D (1272 aa)
       
      0.658
GRMZM2G343218_P01
Uncharacterized protein (1537 aa)
       
      0.658
Zm.138867
1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like (1417 aa)
       
      0.658
Zm.25919
Calcium-transporting ATPase ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1391 aa)
       
 
  0.575
Zm.17277
Uncharacterized protein (400 aa)
       
 
  0.568
Zm.146649
Uncharacterized protein (453 aa)
       
 
  0.568
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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