• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
pco080890 protein (Zea mays) - STRING interaction network
"pco080890" - Protein SCO1 homolog 1 mitochondrial in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco080890Protein SCO1 homolog 1 mitochondrial (307 aa)    
Predicted Functional Partners:
GRMZM2G059981_P01
Cytochrome c oxidase assembly protein ctaG; Uncharacterized protein (233 aa)
   
 
  0.918
GRMZM6G274034_P01
Cytochrome c oxidase assembly protein COX15 (290 aa)
   
 
  0.902
103646146
Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (769 aa)
   
   
  0.872
103641883
Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (768 aa)
     
   
  0.831
GRMZM2G015067_P01
SURF1-like protein; Probably involved in the biogenesis of the COX complex (344 aa)
   
   
  0.786
AC225309.2_FGP003
annotation not available (380 aa)
   
 
  0.775
GRMZM5G862955_P02
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (457 aa)
 
 
  0.746
GRMZM2G116517_P01
Cytochrome c oxidase copper chaperone (73 aa)
     
 
  0.734
GRMZM2G010933_P01
Cytochrome c oxidase copper chaperone; Cytochrome c oxidase copper chaperone isoform 1; Cytochrome c oxidase copper chaperone isoform 2 (77 aa)
     
 
  0.734
100280668
WW domain-containing protein; Protein binding protein; Uncharacterized protein (492 aa)
     
      0.724
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]