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rpl2-B protein (Zea mays) - STRING interaction network
"rpl2-B" - 50S ribosomal protein L2, chloroplastic in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl2-B50S ribosomal protein L2, chloroplastic (150 aa)    
Predicted Functional Partners:
pza02939
Hypothetical protein LOC100274437 (314 aa)
 
  0.999
Zm.84814
LOC100280943 (293 aa)
   
  0.999
rpl22
50S ribosomal protein L22, chloroplastic ; This protein binds specifically to 23S rRNA (136 aa)
   
  0.999
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
     
  0.999
Zm.124974
UBiQuitin family member (143 aa)
     
  0.999
cl9367_1
Hypothetical protein LOC100273201 (139 aa)
   
  0.999
IDP276
Hypothetical protein LOC100274273 (159 aa)
   
  0.999
GRMZM2G450937_P07
60S ribosomal protein L19-3 (989 aa)
   
  0.999
ZemaCp060
50S ribosomal protein L16, chloroplastic (120 aa)
   
  0.999
IDP2420
LOC100285173 (217 aa)
   
  0.999
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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