STRINGSTRING
cl4954_1 protein (Zea mays) - STRING interaction network
"cl4954_1" - Hypothetical protein LOC100280279 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl4954_1Hypothetical protein LOC100280279 (464 aa)    
Predicted Functional Partners:
GRMZM2G453474_P01
Uncharacterized protein (384 aa)
     
 
    0.662
GRMZM2G102756_P01
Annotation not available (322 aa)
     
 
    0.662
Zm.22520
Protein argonaute 1B-like (1102 aa)
       
      0.650
GRMZM2G039455_P01
Hypothetical protein LOC100304327 (1078 aa)
       
      0.650
GRMZM2G107417_P01
Uncharacterized protein (115 aa)
       
 
  0.626
IDP351
Seh1-like protein (323 aa)
       
 
  0.626
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
       
    0.625
Zm.124974
UBiQuitin family member (143 aa)
       
    0.625
AC205012.3_FGP002
Putative uncharacterized protein (553 aa)
     
  0.609
GRMZM2G428670_P01
Ubiquitin family protein (LOC100284492), mRNA (268 aa)
       
    0.607
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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