STRINGSTRING
Zm.18240 protein (Zea mays) - STRING interaction network
"Zm.18240" - Protein SFT2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.18240Protein SFT2 (225 aa)    
Predicted Functional Partners:
GRMZM2G373738_P01
Uncharacterized protein (254 aa)
     
 
  0.670
Zm.158245
Ras-related protein RABD2c-like (205 aa)
     
 
  0.670
GRMZM2G387076_P02
VAMP-like protein YKT62 (359 aa)
     
      0.664
GRMZM2G446711_P01
Annotation not available (133 aa)
     
      0.663
GRMZM2G302155_P01
Annotation not available (105 aa)
     
      0.663
IDP583
VAMP-like protein YKT62 (274 aa)
     
      0.663
GRMZM5G894156_P01
Hypothetical protein LOC100192626 (241 aa)
     
      0.663
GRMZM2G412426_P01
Uncharacterized protein (279 aa)
     
      0.663
GRMZM2G179789_P01
Uncharacterized protein (434 aa)
     
      0.663
GRMZM2G132834_P01
Vesicle transport v-SNARE 12-like (95 aa)
     
      0.663
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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