STRINGSTRING
Zm.139306 protein (Zea mays) - STRING interaction network
"Zm.139306" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.139306Uncharacterized protein (61 aa)    
Predicted Functional Partners:
mybr110
Uncharacterized protein (677 aa)
     
  0.967
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
     
  0.959
GRMZM2G121510_P01
Hypothetical protein LOC100191936 (255 aa)
     
  0.935
mybr14
Hypothetical protein LOC100216783 (773 aa)
     
  0.806
mybr108
Uncharacterized protein (304 aa)
     
  0.806
mybr61
Hypothetical protein LOC100279731 (784 aa)
     
  0.806
Zm.86011
ATSWI3A (557 aa)
     
  0.806
GRMZM2G119758_P01
Annotation not available (129 aa)
     
  0.806
mybr114
Hypothetical protein LOC100279196 (772 aa)
     
  0.806
MYBR88
Hypothetical protein LOC100273414 (495 aa)
     
  0.806
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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