STRINGSTRING
ATG3 protein (Zea mays) - STRING interaction network
"ATG3" - LOC100240689 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG3LOC100240689 (311 aa)    
Predicted Functional Partners:
Atg7
Autophagy-related 7 (1021 aa)
     
  0.998
atg5
Autophagy protein 5 ; Required for autophagy (374 aa)
     
  0.992
Atg12
Autophagy-related 12 ; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
     
  0.983
GRMZM2G078252_P02
LOC100282904 (507 aa)
     
  0.980
Atg8b
Autophagy-related 8c (120 aa)
     
  0.979
Atg8a
LOC100240694 (119 aa)
     
  0.979
Atg8d
Autophagy-related 8e (119 aa)
     
  0.979
GRMZM2G076826_P01
Autophagy-related 8c (120 aa)
     
  0.979
GRMZM2G014975_P01
Autophagy-related 8e (Atg8e), mRNA (138 aa)
     
  0.979
Atg4a
Autophagy-related 4 (492 aa)
     
 
  0.954
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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