STRINGSTRING
GRMZM5G818978_P02 protein (Zea mays) - STRING interaction network
"GRMZM5G818978_P02" - Pentatricopeptide repeat-containing protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G818978_P02Pentatricopeptide repeat-containing protein (574 aa)    
Predicted Functional Partners:
103630321
Decapping nuclease DXO homolog chloroplastic (933 aa)
           
  0.903
100277526
Protein LHCP TRANSLOCATION DEFECT (186 aa)
           
  0.793
100191713
Uncharacterized protein (260 aa)
           
  0.698
nta1
Uncharacterized protein (364 aa)
           
  0.690
pco117016
Thylakoid assembly5 (184 aa)
           
  0.592
103635785
UTP--glucose-1-phosphate uridylyltransferase 3 chloroplastic (964 aa)
           
  0.588
103650684
annotation not available (1061 aa)
           
  0.586
100381965
Uncharacterized protein (110 aa)
           
  0.586
GRMZM2G439589_P02
NAD(P)-binding Rossmann-fold superfamily protein (78 aa)
           
  0.547
100193101
NAD(P)-binding Rossmann-fold superfamily protein (372 aa)
           
  0.547
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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