STRINGSTRING
LPA1 protein (Zea mays) - STRING interaction network
"LPA1" - Low phytic acid 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPA1Low phytic acid 1 ; ABC transporter that may affect phytic acid transport and compartmentalization. May function directly or indirectly in removing phytic acid from the cytosol or in vesicle trafficking. Required for phytic acid accumulation in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds (1041 aa)    
Predicted Functional Partners:
GRMZM2G305211_P02
Uncharacterized protein (644 aa)
   
 
  0.822
GRMZM2G012143_P01
Hypothetical protein LOC100384615 (378 aa)
   
 
  0.796
GRMZM2G011888_P01
Hypothetical protein LOC100277365 (347 aa)
   
 
  0.796
GRMZM5G874955_P01
Hypothetical protein LOC100384044 (688 aa)
     
 
  0.776
GRMZM2G032781_P01
Annotation not available (424 aa)
     
  0.737
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
       
  0.735
Zm.124974
UBiQuitin family member (143 aa)
       
  0.735
GRMZM2G007369_P01
Kinesin-like protein (902 aa)
     
  0.729
Zm.6096
Putative CRAL/TRIO domain containing, Sec14p-like phosphatidylinositol transfer family protein (774 aa)
       
  0.726
GRMZM2G386738_P01
Annotation not available (192 aa)
     
  0.721
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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