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STRINGSTRING
orfX protein (Zea mays) - STRING interaction network
"orfX" - Uncharacterized protein orfX in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
orfXUncharacterized protein orfX; Transport membrane protein (271 aa)    
Predicted Functional Partners:
nad9
NADH dehydrogenase subunit 9 (190 aa)
 
   
  0.936
nad7
Uncharacterized protein; Belongs to the complex I 49 kDa subunit family (394 aa)
   
   
  0.922
GRMZM5G889138_P02
NADH dehydrogenase subunit 7; Belongs to the complex I 49 kDa subunit family (394 aa)
   
   
  0.898
GRMZM2G442129_P01
Uncharacterized protein (190 aa)
 
   
  0.860
nad5
NADH-ubiquinone oxidoreductase chain 5 ; Belongs to the complex I subunit 5 family (483 aa)
   
   
  0.850
mat-r
Maturase (653 aa)
     
   
  0.840
cox1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (528 aa)
   
   
  0.791
GRMZM2G444541_P04
30S ribosomal protein S15, chloroplastic (458 aa)
   
   
  0.777
100192975
Uncharacterized protein (203 aa)
   
     
  0.773
100276717
Uncharacterized protein (155 aa)
   
     
  0.773
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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