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STRINGSTRING
100273953 protein (Zea mays) - STRING interaction network
"100273953" - Plastid transcriptionally active 6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100273953Plastid transcriptionally active 6 (348 aa)    
Predicted Functional Partners:
GRMZM5G846399_P01
annotation not available (94 aa)
     
 
  0.907
GRMZM2G103843_P01
annotation not available (656 aa)
     
   
  0.873
GRMZM5G847982_P01
AT5g56980/MHM17_10-like protein (486 aa)
           
  0.860
PTAC12
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic; Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP. Required for the proper build- up and formation of the PEP-complex. Binds single-stranded (ss) DNA and RNA, but not double-stranded (ds) DNA (555 aa)
     
   
  0.793
100382312
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 (656 aa)
     
   
  0.757
pco085001
Thioredoxin; Uncharacterized protein (210 aa)
     
   
  0.737
PRIN2
Protein PLASTID REDOX INSENSITIVE 2, chloroplastic; Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP (173 aa)
     
   
  0.721
103640934
Proline-rich family protein (1036 aa)
           
  0.706
103650352
annotation not available (1084 aa)
           
  0.706
GRMZM2G466780_P01
Protein kinase (521 aa)
     
   
  0.687
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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