STRINGSTRING
infA protein (Zea mays) - STRING interaction network
"infA" - Translation initiation factor IF-1, chloroplastic in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
infATranslation initiation factor IF-1, chloroplastic ; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex (107 aa)    
Predicted Functional Partners:
rps13
Ribosomal protein S13, mitochondrial (116 aa)
   
  0.997
GRMZM5G887290_P01
Ribosomal protein S13, mitochondrial (116 aa)
   
  0.997
GRMZM2G571251_P01
Uncharacterized protein (263 aa)
   
  0.997
GRMZM2G178341_P01
40S ribosomal protein S18 (152 aa)
   
  0.997
Zm.8875
LOC100283244 (170 aa)
   
  0.997
GRMZM2G130544_P02
Hypothetical protein LOC100273341 (152 aa)
   
  0.997
GRMZM2G062911_P01
Uncharacterized protein (60 aa)
   
  0.997
rpl2-A
50S ribosomal protein L2, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
   
  0.994
rps7
Ribosomal protein S7 (148 aa)
   
  0.990
RPS11
40S ribosomal protein S11 (159 aa)
   
  0.990
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]