• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100192789 protein (Zea mays) - STRING interaction network
"100192789" - PRA1 family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100192789PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (217 aa)    
Predicted Functional Partners:
103629287
Ras-related protein RABD1 (205 aa)
       
 
  0.604
GRMZM2G108258_P02
GTP-binding protein YPTM1; Protein transport. Probably involved in vesicular traffic (By similarity) (243 aa)
       
 
  0.604
GRMZM2G115646_P01
annotation not available (842 aa)
       
      0.589
100283096
Seed maturation protein (243 aa)
       
 
  0.561
100217189
Reticulon-like protein (255 aa)
       
 
  0.561
100273387
Nuclear transport factor 2 (NTF2) family protein (225 aa)
       
      0.542
100272513
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (256 aa)
           
  0.538
GRMZM2G397190_P01
annotation not available (228 aa)
           
  0.459
pco126595a
Integral membrane HRF1 family protein; Protein YIF1A isoform 1; Protein YIF1A isoform 2; Uncharacterized protein (267 aa)
     
 
  0.456
GRMZM2G135599_P01
Protein YIF1A (267 aa)
     
 
  0.456
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (6%) [HD]