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ycf15-A protein (Zea mays) - STRING interaction network
"ycf15-A" - Putative uncharacterized protein ycf15 (ORF 99) in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf15-APutative uncharacterized protein ycf15 (ORF 99) (99 aa)    
Predicted Functional Partners:
orf140-b
Hypothetical protein ZeamMp094 (140 aa)
           
  0.720
orf186
Hypothetical protein ZeamMp175 (186 aa)
           
  0.720
orf911
Hypothetical protein ZeamMp022 (911 aa)
           
  0.529
orf248
Hypothetical protein ZeamMp007 (248 aa)
           
  0.529
GRMZM5G846968_P01
Hypothetical protein ZeamMp138 ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (417 aa)
           
  0.529
orf149-a
Hypothetical protein ZeamMp184 (149 aa)
           
  0.529
orfX
Hypothetical protein X (271 aa)
           
  0.529
orf734
DNA polymerase (EC 2.7.7.7)(S-1 DNA ORF 3) (734 aa)
           
  0.529
orf417
Hypothetical protein ZeamMp138 ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (417 aa)
           
  0.529
rps13
Ribosomal protein S13, mitochondrial (116 aa)
           
  0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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