STRINGSTRING
PARP1 protein (Zea mays) - STRING interaction network
"PARP1" - Poly [ADP-ribose] polymerase 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
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PARP1Poly [ADP-ribose] polymerase 1 (PARP-1)(EC 2.4.2.30)(NAD(+) ADP-ribosyltransferase 1)(ADPRT-1)(Poly[ADP-ribose] synthase 1); Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity) (980 aa)    
Predicted Functional Partners:
GRMZM2G427067_P01
Uncharacterized protein (885 aa)
     
 
  0.951
GRMZM2G155935_P01
Hypothetical protein LOC100280315 (518 aa)
       
  0.912
pco076382
Hypothetical protein LOC100272286 (307 aa)
     
  0.871
Zm.3800
LOC100273758 (pco099025), mRNA (273 aa)
     
  0.861
GRMZM2G061485_P01
OB-fold nucleic acid binding domain containing protein (336 aa)
     
  0.861
GRMZM2G018946_P04
OB-fold nucleic acid binding domain containing protein (337 aa)
     
  0.861
GRMZM2G103740_P01
Replication factor C subunit 2 (339 aa)
     
  0.848
GRMZM5G897818_P01
Replication factor C subunit 5 (354 aa)
     
  0.845
pco093185f
Hypothetical protein LOC100193357 (354 aa)
     
  0.845
GRMZM5G820401_P01
Hypothetical protein LOC100381942 (479 aa)
     
  0.836
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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