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lg4b protein (Zea mays) - STRING interaction network
"lg4b" - Homeobox protein knotted-1-like 5 Fragment in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lg4bHomeobox protein knotted-1-like 5 Fragment (298 aa)    
Predicted Functional Partners:
hb38
Hypothetical protein LOC100272976 (498 aa)
       
 
0.625
hb30
BEL1-related homeotic protein 14 (620 aa)
       
 
0.625
GRMZM2G302905_P01
Annotation not available (642 aa)
       
 
  0.625
hb100
Bell-like homeodomain protein 3 (612 aa)
       
 
0.625
GRMZM2G095389_P01
Uncharacterized protein (580 aa)
     
 
  0.611
RS2
Protein rough sheath 2 (Protein PHANTASTICA)(ZmPHAN); Transcription factor required for normal cell differentiation. Interacts directly with asymmetric leaves 2 (AS2) to repress the knox homeobox genes (370 aa)
     
 
  0.574
pco130567
LOC778427 (371 aa)
           
  0.569
zfl2
Floricaula/leafy-like 2 (394 aa)
     
   
  0.552
fl1
Zea floricaula/leafy1 (391 aa)
     
   
  0.552
GRMZM2G475673_P01
Uncharacterized protein (785 aa)
     
 
  0.550
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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