STRINGSTRING
Zm.17790 protein (Zea mays) - STRING interaction network
"Zm.17790" - PAN1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.17790PAN1 (662 aa)    
Predicted Functional Partners:
cl44325_1
Hypothetical protein LOC100280181 (439 aa)
           
  0.710
Zm.449
Rho-related protein from plants 4 (197 aa)
           
  0.623
GRMZM2G100478_P01
Syntaxin-related protein KNOLLE-like (314 aa)
     
   
  0.568
Zm.67761
Patellin-1 (LOC100284590), mRNA (571 aa)
           
  0.567
GRMZM5G836182_P01
Hypothetical protein LOC100382775 (181 aa)
           
  0.566
GRMZM2G041181_P01
SC3 protein (305 aa)
           
  0.565
arid1
AT-rich interactive domain-containing protein 1-like (814 aa)
           
  0.530
GRMZM2G176029_P01
Hypothetical protein LOC100216965 (361 aa)
           
  0.529
rop5
Rho-related protein from plants 5 (215 aa)
           
  0.529
Zm.38896
Peptide transporter PTR2 (593 aa)
           
  0.529
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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