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Zm.5974 protein (Zea mays) - STRING interaction network
"Zm.5974" - Aspartate aminotransferase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5974Aspartate aminotransferase (459 aa)    
Predicted Functional Partners:
mdh2
Hypothetical protein LOC100274264 (340 aa)
     
  0.986
pco143139c
Hypothetical protein LOC100193743 (394 aa)
     
  0.977
Zm.6655
LOC100193491 (pco104294), mRNA (228 aa)
     
  0.977
Zm.66713
Malate dehydrogenase, glyoxysomal (358 aa)
     
  0.977
GRMZM2G068455_P01
Hypothetical protein LOC100193663 (397 aa)
     
  0.977
mdh4
Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (332 aa)
     
  0.977
GRMZM2G466833_P01
Hypothetical protein LOC100272900 (410 aa)
     
  0.976
Zm.100788
Hypothetical protein LOC100193279 (356 aa)
     
  0.968
cl2158_1
L-lactate dehydrogenase (LDH)(EC 1.1.1.27) (355 aa)
     
  0.968
GDH1
Glutamate dehydrogenase (GDH)(EC 1.4.1.3) (411 aa)
     
  0.960
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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