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STRINGSTRING
tdsgR56E01 protein (Zea mays) - STRING interaction network
"tdsgR56E01" - Exonuclease V chloroplastic in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
tdsgR56E01Exonuclease V chloroplastic (379 aa)    
Predicted Functional Partners:
GRMZM2G372709_P01
V-type proton ATPase subunit d2 (326 aa)
     
        0.711
GRMZM2G052088_P01
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (351 aa)
     
        0.711
GRMZM2G481567_P01
annotation not available (537 aa)
           
  0.535
pco141552
annotation not available (786 aa)
           
  0.535
100381672
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC (706 aa)
           
  0.535
100383136
Tyrosyl-DNA phosphodiesterase 1 (665 aa)
           
  0.525
IDP264
Exonuclease 1 (826 aa)
     
   
  0.524
103632249
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity (179 aa)
 
 
        0.518
GRMZM2G066565_P01
Uncharacterized protein (662 aa)
     
 
  0.513
GRMZM2G037954_P01
Uncharacterized protein (629 aa)
     
 
  0.513
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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