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GRMZM5G838285_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G838285_P01" - 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic-like in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G838285_P019-cis-epoxycarotenoid dioxygenase 1, chloroplastic-like (601 aa)    
Predicted Functional Partners:
GRMZM5G852097_P01
Guanine nucleotide-binding protein subunit beta-like protein (478 aa)
           
  0.721
Zm.9851
Nucleotide binding protein (612 aa)
           
  0.721
Zm.10304
Hypothetical protein LOC100383937 (LOC100383937), mRNA (1467 aa)
           
  0.721
GRMZM2G001934_P01
Hypothetical protein LOC100192365 (958 aa)
           
  0.721
AC196090.3_FGP006
Hypothetical protein LOC100193436 (748 aa)
           
  0.721
GRMZM2G144273_P01
Putative uncharacterized protein (604 aa)
   
   
  0.632
Zm.12554
Sigma factor protein (568 aa)
           
  0.621
Zm.13256
RNA polymerase sigma factor 2 Fragment (504 aa)
           
  0.558
Zm.15207
CUC2 (358 aa)
           
  0.527
gl8
B-keto acyl reductase (326 aa)
           
  0.524
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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