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STRINGSTRING
100279254 protein (Zea mays) - STRING interaction network
"100279254" - Protein RTF1-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100279254Protein RTF1-like protein (647 aa)    
Predicted Functional Partners:
100279518
Protein LEO1-like protein (678 aa)
     
 
  0.988
103631885
annotation not available (661 aa)
     
 
  0.988
103646054
annotation not available (1065 aa)
     
 
  0.974
103626013
annotation not available (379 aa)
     
 
  0.969
GRMZM2G423663_P01
Uncharacterized protein (454 aa)
     
 
  0.954
gtc102
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (1055 aa)
     
 
  0.937
100273854
Protein PAF1-like protein (214 aa)
     
 
  0.932
GRMZM2G055520_P01
Protein PAF1-like protein (453 aa)
     
 
  0.932
umc1614
Chromatin structure-remodeling complex protein SYD (2594 aa)
     
 
  0.930
103630072
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (644 aa)
     
 
  0.899
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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