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GRMZM5G841101_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G841101_P01" - RNA-binding (RRM/RBD/RNP motifs) family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G841101_P01RNA-binding (RRM/RBD/RNP motifs) family protein (287 aa)    
Predicted Functional Partners:
tdsgR54E12
Magnesium protoporphyrin IX methyltransferase chloroplastic (324 aa)
   
        0.971
100284837
Quinone oxidoreductase-like protein At1g23740 (386 aa)
   
   
  0.945
GRMZM2G037778_P01
Uncharacterized protein (203 aa)
   
        0.945
100283690
Peroxiredoxin Q chloroplastic; Peroxiredoxin bcp; Uncharacterized protein (218 aa)
   
        0.918
IDP813
50S ribosomal protein L13; Uncharacterized protein ; Belongs to the universal ribosomal protein uL13 family (232 aa)
   
      0.915
GRMZM2G109165_P03
50S ribosomal protein L3-1 chloroplastic; Belongs to the universal ribosomal protein uL3 family (262 aa)
   
 
  0.909
100193993
Plastid-specific 30S ribosomal protein 3; Uncharacterized protein (177 aa)
   
      0.906
GRMZM2G032721_P02
annotation not available (82 aa)
   
      0.906
GRMZM2G096962_P01
50S ribosomal protein L9; Uncharacterized protein (194 aa)
   
      0.889
IDP635
Heavy metal transport/detoxification superfamily protein (161 aa)
     
        0.885
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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