• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100193725 protein (Zea mays) - STRING interaction network
"100193725" - KH domain-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100193725KH domain-containing protein; Protein held out wings; Uncharacterized protein (289 aa)    
Predicted Functional Partners:
100193418
RNA-binding (RRM/RBD/RNP motifs) family protein (306 aa)
       
 
  0.740
100279374
Mediator of RNA polymerase II transcription subunit 14 (1724 aa)
     
      0.725
100193504
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (232 aa)
       
      0.723
AC203535.4_FGP001
CDC5 protein (925 aa)
     
      0.717
GRMZM5G804064_P01
ATP-dependent RNA helicase DRS1 ; Belongs to the DEAD box helicase family (770 aa)
     
 
  0.662
cl47231_1a
DEAD-box ATP-dependent RNA helicase 28; Belongs to the DEAD box helicase family (786 aa)
     
 
  0.662
GRMZM5G883043_P01
Mediator of RNA polymerase II transcription subunit 23 (284 aa)
       
      0.649
GRMZM5G824439_P01
annotation not available (1104 aa)
       
      0.649
GRMZM2G110500_P01
Mediator complex subunit 10 CG5057-PA (187 aa)
       
      0.649
100284160
Mediator complex subunit 10 CG5057-PA (190 aa)
       
      0.649
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]