STRINGSTRING
Zm.144008 protein (Zea mays) - STRING interaction network
"Zm.144008" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.144008Uncharacterized protein (94 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha (PEP)(EC 2.7.7.6)(Plastid-encoded RNA polymerase subunit alpha)(RNA polymerase subunit alpha); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)
       
 
  0.679
GRMZM2G091419_P01
Hypothetical protein LOC100382312 (656 aa)
     
   
  0.575
Zm.31454
Hypothetical protein LOC100275546 (555 aa)
     
   
  0.512
Zm.93751
Hypothetical protein LOC100273953 (LOC100273953), mRNA (348 aa)
     
   
  0.432
GRMZM5G807767_P03
Hypothetical protein LOC100279779 (494 aa)
     
   
  0.415
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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