STRINGSTRING
rps4-1 protein (Zea mays) - STRING interaction network
"rps4-1" - Ribosomal protein S4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps4-1Ribosomal protein S4 (358 aa)    
Predicted Functional Partners:
Zm.67341
Photosystem I reaction center subunit III (225 aa)
           
  0.566
cyp12
Flavonoid 3-monooxygenase (517 aa)
           
  0.470
orf122
Hypothetical protein ZeamMp039 (122 aa)
           
  0.468
GRMZM2G152599_P01
Hypothetical protein LOC100273480 (138 aa)
     
   
  0.467
GRMZM2G325749_P01
50S ribosomal protein L18 (114 aa)
           
  0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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