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STRINGSTRING
c3h25 protein (Zea mays) - STRING interaction network
"c3h25" - Rough endosperm 3 zeta isoform in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c3h25Rough endosperm 3 zeta isoform (272 aa)    
Predicted Functional Partners:
GRMZM6G933659_P01
annotation not available (208 aa)
     
 
  0.851
pco074093
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (594 aa)
     
 
  0.851
tdsgR21G05
RNA-binding (RRM/RBD/RNP motifs) family protein (635 aa)
     
 
  0.851
100192903
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (539 aa)
     
 
  0.851
103648165
annotation not available (704 aa)
     
 
  0.851
100272843
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (590 aa)
     
 
  0.851
Rgh3
Rough endosperm3; RGH3 splicing factor; RGH3/ZmURP alpha protein isoform; Rough endosperm 3 alpha isoform (349 aa)
 
       
  0.818
100383273
U11/U12 small nuclear ribonucleoprotein 35 kDa protein (483 aa)
     
 
  0.788
LOC542179
U1 snRNP (491 aa)
     
 
  0.788
100286002
Pre-mRNA-splicing factor prp45 (609 aa)
     
 
  0.784
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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