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mat-r protein (Zea mays) - STRING interaction network
"mat-r" - Maturase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mat-rMaturase (653 aa)    
Predicted Functional Partners:
cox1
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide I); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (528 aa)
     
   
  0.797
nad9
NADH dehydrogenase subunit 9 (190 aa)
     
   
  0.760
nad6
NADH dehydrogenase subunit 6 (220 aa)
     
   
  0.746
GRMZM2G109332_P01
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide II) (457 aa)
     
   
  0.744
cox2
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide II); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (457 aa)
     
   
  0.742
nad3
NADH dehydrogenase subunit 3 ; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (118 aa)
     
   
  0.729
ZemaCp064
Hypothetical protein ZeamMp129 (247 aa)
     
   
  0.720
GRMZM2G309193_P01
Hypothetical protein ZeamMp129 (247 aa)
     
   
  0.720
atp6
ATP synthase subunit a (F-ATPase protein 6) (410 aa)
     
   
  0.614
nad4
NADH dehydrogenase subunit 4 (495 aa)
     
   
  0.613
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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