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GRMZM5G856720_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G856720_P01" - Phytanoyl-CoA dioxygenase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G856720_P01Phytanoyl-CoA dioxygenase (156 aa)    
Predicted Functional Partners:
cl14903_1
Prolyl 4-hydroxylase 1 (263 aa)
           
  0.746
100280392
Electron transfer flavoprotein-ubiquinone oxidoreductase mitochondrial (591 aa)
   
   
  0.722
GRMZM2G348578_P01
Putative prolyl 4-hydroxylase 9 (294 aa)
           
  0.707
100384695
Cytochrome P450 family 77 protein (552 aa)
   
   
  0.626
GRMZM2G094273_P01
Cytochrome P450 family 77 protein (440 aa)
   
   
  0.626
P4H2-1
Prolyl 4-hydroxylase 2; Uncharacterized protein (299 aa)
           
  0.615
pco071536
Prolyl 4-hydroxylase 7; Uncharacterized protein (298 aa)
           
  0.615
100273608
D-2-hydroxyglutarate dehydrogenase mitochondrial (562 aa)
           
  0.598
Cel4
Endoglucanase (628 aa)
           
  0.597
GRMZM5G855891_P01
Prolyl 4-hydroxylase 1; Uncharacterized protein (364 aa)
   
     
  0.590
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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