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STRINGSTRING
GRMZM5G857708_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G857708_P01" - DExH-box ATP-dependent RNA helicase DExH14 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G857708_P01DExH-box ATP-dependent RNA helicase DExH14 (57 aa)    
Predicted Functional Partners:
pza02791
annotation not available (1472 aa)
     
 
  0.951
GRMZM2G494600_P01
annotation not available (487 aa)
     
 
  0.941
GRMZM2G307567_P01
Uncharacterized protein (1364 aa)
     
 
  0.928
100277544
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.895
GRMZM2G117346_P01
Splicing factor 3B subunit 1 (1280 aa)
     
 
  0.895
GRMZM2G057394_P02
ATP-dependent RNA helicase DDX23; Uncharacterized protein ; Belongs to the DEAD box helicase family (758 aa)
     
 
  0.892
GRMZM2G023471_P01
Uncharacterized protein (1044 aa)
     
 
  0.885
103629533
Pre-mRNA-processing-splicing factor 8A (2366 aa)
     
 
  0.885
GRMZM2G175804_P01
annotation not available (155 aa)
     
 
  0.885
103638016
Pre-mRNA-processing-splicing factor 8A (2363 aa)
     
 
  0.885
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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