STRINGSTRING
Zm.123429 protein (Zea mays) - STRING interaction network
"Zm.123429" - Beta-hexosaminidase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.123429Beta-hexosaminidase (578 aa)    
Predicted Functional Partners:
GRMZM2G141456_P01
Hypothetical protein LOC100191620 (454 aa)
   
   
  0.965
GRMZM2G090441_P01
Hypothetical protein LOC100383770 (484 aa)
         
  0.957
Zm.1765
LOC100283208 (286 aa)
   
   
  0.945
GRMZM2G145518_P01
Hypothetical protein LOC100280135 (LOC100280135), mRNA (379 aa)
         
  0.933
GRMZM2G129189_P01
Endochitinase PR4 (271 aa)
         
  0.933
GRMZM2G122708_P01
Annotation not available (194 aa)
         
  0.933
Zm.24175
LOC100284192 (357 aa)
         
  0.933
GRMZM2G051921_P01
Hypothetical protein LOC100384000 (282 aa)
         
  0.933
GRMZM2G346455_P05
Hypothetical protein LOC100274554 (423 aa)
   
 
  0.920
Zm.1216
Alpha-galactosidase (414 aa)
   
 
  0.920
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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