STRINGSTRING
ccmB protein (Zea mays) - STRING interaction network
"ccmB" - Cytochrome c biogenesis B in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmBCytochrome c biogenesis B (206 aa)    
Predicted Functional Partners:
GRMZM5G898647_P01
Cytochrome c biogenesis C (240 aa)
           
  0.721
GRMZM5G867512_P01
Cytochrome c biogenesis FN (620 aa)
           
  0.721
ccmFN
Cytochrome c biogenesis FN (621 aa)
           
  0.721
ccmC
Cytochrome c biogenesis C (240 aa)
           
  0.721
GRMZM2G180080_P01
Mitochondrial protein (521 aa)
           
  0.561
nad9
NADH dehydrogenase subunit 9 (190 aa)
     
   
  0.540
nad7
NADH dehydrogenase subunit 7 (394 aa)
           
  0.530
ZemaCp061
30S ribosomal protein S3, chloroplastic (224 aa)
           
  0.530
GRMZM5G861791_P01
Ribosomal protein S3, mitochondrial (559 aa)
           
  0.529
orf119-c
Hypothetical protein ZeamMp169 (119 aa)
           
  0.526
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]